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<h4>[ All Bugs that I Hate ]</h4> <TABLE WIDTH="760" ALIGN="center" border="0" CELLSPACING="4" CELLPADDING="0"> <TR> <TD> <h4>:: Bacteria ::</h4> <ul> <li>rigid, thick-walled cells <ul> <li>free-living (extracellular bacteria) <ul> <li>Gram-positive <ul> <li>cocci <ul> <ul> <ul> <ul> <li>Streptococcus <ul> <li>group A S. - S. pyogenes <li>group B S. - S. agalactiae <li>group D S. - enterococcus : E. faecalis | E. faecium - non-enterococcus : S. bovis | S. equinus <li>S. viridans - S. salivarius | S. sanguis | S. mitis | S. mutans - S. intermedius | S. constellatus | S. angionosus (S. intermedius group) <li>S. pneumoniae (pneumococcus) </ul> <li>Staphylococcus <ul> <li>S. aureus <li>S. epidermidis <li>S. saprophyticus </ul> </ul> </ul> </ul> </ul> <li>spore-forming bacilli <ul> <li>aerobic <ul> <ul> <ul> <li>Bacillus <ul> <li>B. anthracis <li>B. cereus </ul> </ul> </ul> </ul> <li>anaerobic <ul> <ul> <ul> <li>Clostridium <ul> <li>C. botulinum <li>C. difficile <li>C. perfringens <li>C. tetani </ul> </ul> </ul> </ul> </ul> <li>non-spore-forming bacilli </ul> <li>Gram-negative <ul> <li>cocci <ul> <ul> <ul> <ul> <li>Neisseria <ul> <li>N. meningitidis (meningococcus) <li>N. gonorrhoeae (gonococcus) </ul> </ul> </ul> </ul> </ul> <li>bacilli <ul> <li>facultative <ul> <li>straight <ul> <li>respiratory organism <ul> <li>Haemophilus <ul> <li>H. influenzae <li>H. ducreyi <li>H. vaginalis (Gardnerella vaginalis) </ul> <li>Legionella pneumonphila <li>Bordetella pertussis </ul> <li>zoonotic organism <ul> <li>Brucella <ul> <li>B. melitensis <li>B. suis <li>B. abortus <li>B. canis </ul> <li>Francisella tularensis <li>Yersinia <ul> <li>Y. pestis <li>Y. enterocolitica <li>Y. pseudotuberculosis </ul> <li>Pasteurella multocida </ul> <li>enteric organism - Enterobacteriaceae <ul> <li>Escherichia coli [both within & outside enteric tract] <li>Salmonella <ul> <li>S. typhi | S. paratyphi <li>S. choleraesuis <li>S. typhimurium | S. enteritidis </ul> <li>Shigella [within enteric tract] <ul> <li>S. dysenteriae <li>S. sonnei </ul> <li>Klebsiella pneumoniae [outside enteric tract] <li>Enterobacter cloacae <li>Serratia marcescens <li>Proteus mirabilis <li>Providencia rettgeri <li>Morganella morganii </ul> </ul> <li>curved - Vibrionaceae <ul> <ul> <li>Vibrio <ul> <li>V. cholerae <li>V. parahaemolyticus <li>V. vulnificus </ul> <li>Campylobacter <ul> <li>C. jejuni <li>C. intestinalis (=fetus) </ul> <li>Helicobacter(=Campylobacter) pylori </ul> </ul> </ul> <li>aerobic - Pseudomonas <ul> <ul> <ul> <li>Pseudomonas <ul> <li>P. aeruginosa <li>P. cepacia <li>P. maltophilia </ul> </ul> </ul> </ul> <li>anaerobic - Bacteroidaceae <ul> <ul> <ul> <li>Bacteroides <ul> <li>B. fragilis <li>B. melanogenicus </ul> <li>Fusobacterium </ul> </ul> </ul> </ul> </ul> <li>acid-fast <ul> <ul> <ul> <ul> <ul> <li>Mycobacterium <ul> <li>M. tuberculosis <li>M. bovis <li>M. kansasii | M. marinum : group Ⅰ(photochromogen) <li>M. scrofulaceum : group Ⅱ(scotochromogen) <li>M. avium-intracellulare complex : group Ⅲ(nonchromogen) <li>M. fortuitum-chelonei complex | M. smegmatis : group Ⅳ(rapidly growing mycobacteria) <li>M. leprae </ul> </ul> </ul> </ul> </ul> </ul> </ul> <li>non-free-living (obligate intracellular bacteria) <ul> <ul> <ul> <ul> <ul> <ul> <li>Chlamydia <ul> <li>C. trachomatis <li>C. psittaci <li>C. pneumoniae </ul> <li>Rickettsia <ul> <li>R. rickettsii <li>R. akari <li>R. prowazekii <li>R. typhi <li>R. tsutsugamushi </ul> </ul> </ul> </ul> </ul> </ul> </ul> </ul> <li>flexible, thin-walled cells (spirochetes) <ul> <ul> <ul> <ul> <ul> <ul> <ul> <li>Treponema <ul> <li>T. pallidum <li>T. pallidum subspecies - endemicum | pertenue | carateum </ul> <li>Borrelia <ul> <li>B. burgdorferi <li>B. recurrentis <li>B. hermsii </ul> <li>Leptospira interrogans </ul> </ul> </ul> </ul> </ul> </ul> </ul> <li>wall-less cells <ul> <ul> <ul> <ul> <ul> <ul> <ul> <li>Mycoplasma <ul> <li>M. pneumoniae <li>Ureaplasma urealyticum (tiny strain mycoplasma) </ul> </ul> </ul> </ul> </ul> </ul> </ul> </ul> </ul> <hr size="1"> <h4>:: Virus ::</h4> <ul> <li>(+) ssRNA - icosahedral <ul> <li>enveloped <ul> <li>nonsegmented <ul> <li>Flaviviridae <li>Togaviridae <li>Coronaviridae </ul> </ul> <li>naked <ul> <li>nonsegmented <ul> <li>Picornaviridae <li>Caliciviridae </ul> </ul> </ul> <li>(-) ssRNA - helical <ul> <li>enveloped <ul> <li>nonsegmented <ul> <li>Paramyxoviridae <li>Rhabdoviridae <li>Filoviridae <li>Deltaviridae </ul> <li>segmented <ul> <li>Orthomyxoviridae <li>Bunyaviridae <li>Arenaviridae </ul> </ul> </ul> <li>dsRNA - icosahedral <ul> <li>naked <ul> <li>segmented <ul> <li>Reoviridae </ul> </ul> </ul> <li>(+) ssRNA - icosahedral <ul> <li>enveloped <ul> <li>segmented <ul> <li>linear <ul> <li>Retroviridae <ul> <ul> <li>unnamed genus <ul> <li>human T-cell leukemia virus 1 (HTLV-1) <li>human T-cell leukemia virus 2 (HTLV-2) </ul> <li>lentivirus <ul> <li>human immunodeficiency virus 1 (HIV-1) <li>human immunodeficiency virus 2 (HIV-2) </ul> </ul> </ul> </ul> </ul> </ul> </ul> <li>ssDNA - icosahedral <ul> <li>naked <ul> <ul> <li>linear <ul> <li>Parvoviridae <ul> <ul> <li>erythrovirus <ul> <li>human parvovirus B19 </ul> </ul> </ul> </ul> </ul> </ul> </ul> <li>dsDNA - icosahedral <ul> <li>enveloped <ul> <ul> <li>linear <ul> <li>Herpesviridae <ul> <li>alphaherpesvirinae <ul> <li>simplexvirus <ul> <li>herpes simplex virus type 1 (human herpesvirus 1) <li>herpes simplex virus type 2 (human herpesvirus 2) </ul> <li>varicellovirus <ul> <li>varicella-zoster virus (human herpesvirus 3) </ul> </ul> <li>betaherpesvirinae <ul> <li>cytomegalovirus <ul> <li>cytomegalovirus (human herpesvirus 5) </ul> <li>roseolovirus <ul> <li>human herpesvirus 6 <li>human herpesvirus 7 </ul> </ul> <li>gammaherpesvirinae <ul> <li>lymphocryptovirus <ul> <li>epstein-barr virus (human herpesvirus 4) </ul> <li>rhadinovirus <ul> <li>kaposi's sarcoma-associated herpesvirus (human herpesvirus 8) </ul> </ul> </ul> <li>Poxviridae <ul> <ul> <li>orthopoxvirus <ul> <li>smallpox virus (variola virus) <li>vaccina virus <li>monkeypox virus <li>cowpox virus </ul> <li>parapoxvirus <ul> <li>orf virus <li>pseudocowpox virus </ul> <li>yatapoxvirus <ul> <li>yabapox virus <li>tanapox virus </ul> <li>molluscipoxvirus <ul> <li>molluscum contagiosum virus </ul> </ul> </ul> </ul> <li>circular <ul> <li>Hepadnaviridae <ul> <ul> <li>orthohepadnavirus <ul> <li>hepatitis B virus </ul> </ul> </ul> </ul> </ul> </ul> <li>naked <ul> <ul> <li>linear <ul> <li>Adenoviridae <ul> <ul> <li>mastadenovirus <ul> <li>human adenovirus </ul> </ul> </ul> </ul> <li>circular <ul> <li>Papovaviridae <ul> <ul> <li>papillomavirus <ul> <li>human papillomavirus </ul> <li>polyomavirus <ul> <li>BK virus <li>JC virus <li>SV40 virus </ul> </ul> </ul> </ul> </ul> </ul> </ul> </ul> <hr size="1"> <h4>:: Fungi ::</h4> <ul> <li>cutaneous mycose <ul> <li>Trichophyton | Microsporum | Epidermophyton - dermatophytes <li>Malassezia furfur <li>Cladosporium werneckii </ul> <li>subcutaneous mycose <ul> <li>Sporothrix schenckii <li>Phialophora | Cladosporium | Fonsecaea <li>Petriellidium madurella </ul> <li>systemic mycose <ul> <li>Coccidioides immitis <li>Histoplasma capsulatum <li>Blastomyces dermatitidis <li>Paracoccidioides brasiliensis </ul> <li>opportunistic mycose <ul> <li>Candida albicans <li>Cryptococcus neoformans <li>Aspergillus <ul> <li>A. fumigatus <li>A. flavus <li>A. niger </ul> <li>Mucor rhizopus <li>Pneumocystis carinii </ul> </ul> <hr size="1"> <h4>:: Protozoa ::</h4> <ul> <li>intestinal protozoa <ul> <li>amebas (sarcodina) <ul> <li>Entamoeba <ul> <li>E. histolytica <li>E. coli </ul> </ul> <li>sporozoans (sporozoa) <ul> <li>Cryptosporidium parvum </ul> <li>flagellates (mastigophora) <ul> <li>Giardia lamblia </ul> </ul> <li>urogenital protozoa <ul> <li>flagellates (mastigophora) <ul> <li>Trichomonas vaginalis </ul> </ul> <li>blood & tissue protozoa <ul> <li>sporozoans (sporozoa) <ul> <li>Plasmodium <ul> <li>P. vivax <li>P. ovale <li>P. malariae <li>P. falciparum </ul> <li>Toxoplasma gondii </ul> <li>flagellates (mastigophora) <ul> <li>Trypanosoma <ul> <li>T. cruzi <li>T. brucei gambiense <li>T. brucei rhodesiense </ul> <li>Leishmania <ul> <li>L. donovani <li>L. tropica <li>L. mexicana <li>L. braziliensis </ul> </ul> <li>fungus <ul> <li>Pneumocystis carinii </ul> </ul> </ul> <hr size="1"> <h4>:: Metazoa (Helminths, Worms) ::</h4> <ul> <li>platyhelminthes (flatworms) <ul> <li>trematoda (flukes) <ul> <li>Schistosoma (blood fluke) <ul> <li>S. mansoni <li>S. japonicum <li>S. haematobium </ul> <li>Clonorchis sinensis (Asian liver fluke) <li>Paragonimus westermani (lung fluke) </ul> <li>cestoda (tapeworms) <ul> <li>Taenia <ul> <li>T. solium (pork tapeworm) <li>T. saginata (beef tapeworm) </ul> <li>Diphyllobothrium latum (fish tapeworm) <li>Echinococcus <ul> <li>E. granulosus (dog tapeworm) <li>E. multilocularis </ul> <li>Hymenolepis nana <li>Dipylidium caninum </ul> </ul> <li>nemathelminthes (roundworms) <ul> <li>intestinal nematodes <ul> <li>Enterobius vermicularis (pinworm) <li>Trichuris trichiura (whipworm) <li>Ascaris lumbricoides (roundworm) <li>Ancylostoma duodenale | Necator americanus (hookworm) <li>Strongyloides stercoralis (threadworm) <li>Trichinella spiralis </ul> <li>tissue nematodes <ul> <li>Wuchereria bancrofti | Brugia malayi <li>Onchocerca volvulus <li>Loa loa <li>Dracunculus medinensis (guinea fire worm) </ul> <li>nematodes whose larvae cause disease <ul> <li>Toxocara canis <li>Ancylostoma <ul> <li>A. caninum <li>A. brazilience </ul> <li>Angiostrongylus cantonensis <li>Anisakis simplex </ul> </ul> </ul> </TD> </TR> </TABLE>